Abstract: Sequence alignment is a fundamental task in bioinformatics, requiring intensive computational processing that grows quadratically with sequence size. High-Performance Computing (HPC) offers ...

In this tutorial, we present an advanced, hands-on tutorial that demonstrates how we use Qrisp to build and execute non-trivial quantum algorithms. We walk through core Qrisp abstractions for quantum ...

Abstract: DNA sequence alignment and approximate string matching present significant challenges across various domains, including natural language processing, data mining, and bioinformatics. Numerous ...

A high-performance GPU-accelerated framework for Smith-Waterman sequence alignment, featuring optimized Triton kernels and custom compiler extensions for automatic shared memory optimization.