Abstract: Multiple Sequence Alignment (MSA) is a fundamental challenge in bioinformatics, forming the basis for addressing numerous computational biology problems, e.g., protein structure prediction ...
The EMBL File Format Converter is a specialized tool that converts biological sequence data from the EMBL format to various standard formats. It streamlines bioinformatics workflows by accurately ...
A command-line tool for detecting and extracting single homeologous polymorphisms (SHPs) from the subgenomes of allopolyploid species. This tool integrates three main algorithms, WGA, VCF2ALIGNMENT ...
Our STOCKHOLM File Format Converter is a specialized bioinformatics utility designed to improve interoperability among multiple sequence alignments (MSAs). This tool expertly converts alignments from ...
With MassiveFold, scientists have unlocked AlphaFold's full potential, making high-confidence protein predictions faster and more accessible, fueling breakthroughs in biology and drug discovery. Brief ...
Abstract: Multiple sequence alignment (MSA) is critical in several areas of science, especially in bioinformatics. Expressive advances have been developed in MSA and many methods, algorithms and tools ...
NEFFy is a versatile and efficient tool for bioinformatics research, offering advanced features for calculating NEFF (Normalized Effective Number of Sequences) for Multiple Sequence Alignments (MSA)s ...
Deep learning has brought major advances to the analysis of biological sequences. Self-supervised models, based on approaches from natural language processing and trained on large ensembles of protein ...
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